UDF on HPC for a Batch job

ashchashch Member Posts: 3

Hi,

I am trying to execute a UDF (Define_Spcific_Heat) that runs nicely on my own machine. However, I am facing issues when trying to execute the same via a batch job on the HPC. The sequence of my workflow is as follows, please let me know if it needs any correction

  1. I have complied the UDF on my machine (Cp inputted as a user-defined function) and then exporting the cas file to be run on the HPC. 
  2. The directory of the HPC contains both the cas file and the libudf folder
  3. The journal file has the following commands
  4. /define/user-defined/compiled-functions compile libudf yes 'Specific_Heat.c' ""
  5. /define/user-defined/compiled-funcitons load libudf 
  6. Finally the error I get is as follows: 
for d in lnamd64/[23]*; do \
 ( \
  cd $d; \
 if [ -f udf_names.c ]; then \
         mv -f udf_names.c udf_names.cRenamed; \
        fi; \
 rm -rf *.{c,h,cpp,hpp}; \
 if [ -f udf_names.cRenamed ]; then \
         mv -f udf_names.cRenamed udf_names.c; \
        fi; \
  for f in ../../src/*.{c,h,cpp,hpp} ../../src/makefile ../../src/user.udf; do \
   if [ -f $f -a ! -f `basename $f` ]; then \
    echo "# linking to" $f "in" $d; \
    ln -s $f .; \
   fi; \
  done; \
  echo ""; \
  echo "# building library in" $d; \
  if [ "" = "1" ]; then \
 echo "# using gcc64"; \
 make ARCHC=gcc64 -k>makelog 2>&1; \
  else \
 if [ "" = "1" ]; then \
 echo "# using gcc"; \
 make ARCHC=gcc -k>makelog 2>&1; \
 else \
 make -k>makelog 2>&1; \
 fi; \
  fi;\
  cat makelog; \
 ) \
done
# linking to ../../src/Specific_Heat.c in lnamd64/3ddp_host
# building library in lnamd64/3ddp_host
make[1]: Entering directory `/zhome/d7/e/113826/Ashish/Corner_Air_Gap_200_290/libudf/lnamd64/3ddp_host'
make[1]: *** No rule to make target `compiled-funcitons', needed by `'Specific_Heat.c''.
make[1]: *** No rule to make target `read-case', needed by `'Specific_Heat.c''.
make[1]: *** No rule to make target `FLTG.2-Setup-Output.cas.gz', needed by `'Specific_Heat.c''.
make[1]: *** No rule to make target `libudf', needed by `'Specific_Heat.c''.
make[1]: *** No rule to make target `load', needed by `'Specific_Heat.c''.
make[1]: Target `default' not remade because of errors.
make[1]: Leaving directory `/zhome/d7/e/113826/Ashish/Corner_Air_Gap_200_290/libudf/lnamd64/3ddp_host'
# linking to ../../src/Specific_Heat.c in lnamd64/3ddp_node
# building library in lnamd64/3ddp_node
make[1]: Entering directory `/zhome/d7/e/113826/Ashish/Corner_Air_Gap_200_290/libudf/lnamd64/3ddp_node'
make[1]: *** No rule to make target `compiled-funcitons', needed by `'Specific_Heat.c''.
make[1]: *** No rule to make target `read-case', needed by `'Specific_Heat.c''.
make[1]: *** No rule to make target `FLTG.2-Setup-Output.cas.gz', needed by `'Specific_Heat.c''.
make[1]: *** No rule to make target `libudf', needed by `'Specific_Heat.c''.
make[1]: *** No rule to make target `load', needed by `'Specific_Heat.c''.
make[1]: Target `default' not remade because of errors.
make[1]: Leaving directory `/zhome/d7/e/113826/Ashish/Corner_Air_Gap_200_290/libudf/lnamd64/3ddp_node'

The above picture showcases the way all the files are organized.


Any comments/suggestions would be highly appreciatyed

Thanks,

Ashish

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