You can save hard-copies of the particle tracks at instantenous time-steps/iterations. Auto-execution commands are useful for this purpose. I would follow this procedure:
1) Define the particle tracks properties (injection name, #skip, filter options, coloring, etc...)
2) Display the object with the proper scene settings (camera properties, legend, lightning options, ...). I'd save the view to be sure that during each export, you are displaying what you want.
3) Create the autoexecution command (define frequency, file-name, -be sure to append the time-step %t or iteration number %i to the file-name, etc ...)
4) Run the simulation for the desired time-steps/iterations
Then just use Matlab or ffmpeg to create the animation from these pictures.
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